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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8417 chr8:11667179 C/T SGK223 chr8:8175258-8244008:- -0.35 -5.94 5.45E-9 Box Plot
THCA rs852252 chr5:35920552 A/C AURKA chr20:54944445-54967393:- -0.26 -5.88 7.6E-9 Box Plot
THCA rs853676 chr6:28299687 C/T BTN3A2 chr6:26365387-26378548:+ -0.46 -8.87 1.52E-17 Box Plot
THCA rs853678 chr6:28297313 T/A BTN3A2 chr6:26365387-26378548:+ -0.44 -8.66 7.5E-17 Box Plot
THCA rs853679 chr6:28296863 C/A BTN3A2 chr6:26365387-26378548:+ -0.44 -8.66 7.5E-17 Box Plot
THCA rs853681 chr6:28296650 G/T BTN3A2 chr6:26365387-26378548:+ -0.43 -8.4 5.01E-16 Box Plot
THCA rs853682 chr6:28295875 T/C BTN3A2 chr6:26365387-26378548:+ -0.44 -8.66 7.5E-17 Box Plot
THCA rs853685 chr6:28288785 C/T BTN3A2 chr6:26365387-26378548:+ -0.45 -8.82 2.07E-17 Box Plot
THCA rs853694 chr6:28279100 A/T BTN3A2 chr6:26365387-26378548:+ -0.46 -9.11 2.31E-18 Box Plot
THCA rs854990 chr11:49224241 C/T FOLH1B chr11:89372395-89431886:+ 0.49 7.95 1.38E-14 Box Plot
THCA rs8564 chr1:26605069 T/C GLRX chr5:95087023-95158709:- 0.26 6.02 3.55E-9 Box Plot
THCA rs858723 chr11:130094626 C/T CG030 chr13:33078645-33083532:- -0.25 -6.1 2.22E-9 Box Plot
THCA rs864158 chr11:130165092 C/G CG030 chr13:33078645-33083532:- -0.24 -5.98 4.37E-9 Box Plot
THCA rs867796 chr6:26665451 G/T ZNF322B chr9:99957633-99961910:- 0.75 15.39 1.08E-43 Box Plot
THCA rs868190 chr6:26665835 G/A ZNF322B chr9:99957633-99961910:- 0.75 15.27 3.52E-43 Box Plot